Top Level Name
⌊ Superfamily (core) Radical SAM
⌊ Subgroup SPASM/twitch domain containing
Family known  |
|||||||
| Total |
100% |
<100% |
Family unknown |
||||
| Functional domains | 1827 | 585 | 1 | 1241 | |||
| UniProtKB | 4176 | 0 | 2591 | 1585 | |||
| GI | 7751 | 4040 | 3 | 3708 | |||
| Structures | 0 | ||||||
| Reactions | 0 | ||||||
| Functional domains of this subgroup were last updated on June 10, 2017 | |||||||
| New functional domains were last added to this subgroup on July 9, 2014 | |||||||
This subgroup is named after the two known reaction types in this set of proteins.
No References.
No notes.
Static File Downloads
| File Name | Description | Parameters | Stats |
|---|---|---|---|
| network.sg1385.bs60.mek250K.xgmml | One node per sequence network | min bit score = 60 max edge count = 250K |
size = 130M num_edges = 250000 num_nodes = 1827 |
| repnet.sg1385.th50.pE20.mek250K.xgmml | Representative network: each node is a group of similar sequences | node similarity threshold = 50 max edge count = 250K min -log10 E = 20 |
size = 5.4M num_edges = 15191 num_nodes = 216 |
| sfld_alignment_sg1385.msa | Annotated Sequence Alignment, Stockholm format | 7 sequences size: 5.0K |
Total number of functional domains in this group.
Number of Functional Domains that have been manually or automatically been assigned to a family.
Number of Functional Domains that have not been assigned to a family.
Number of structures available from the PDB for members of this group.
Number of Functional Domains with 100% of Conserved Residues
Number of Functional Domains with less than 100% Conserved Residues
| Subgroup ▸ Legend | T |
K |
C |
U |
S |
||
|---|---|---|---|---|---|---|---|
| ┗ 2: heme carboxy lyase like | 1827 | 586 | 585 | 1241 | 0 | ||
| ┗ alternative heme biosynthesis C (AhbC-like) | 146 | 146 | 145 | 0 | |||
| ┗ alternative heme biosynthesis D (AhbD-like) | 71 | 71 | 71 | 0 | |||
| ┗ C-terminal tyrosine decarboxylase (MftC-like) | 181 | 181 | 181 | 0 | |||
| ┗ heme D1 biosynthesis (NirJ-like) | 188 | 188 | 188 | 0 |
Depth of the multi-level Subgroup hierarchy.