Top Level Name

  ⌊ Superfamily (core) Enolase

    ⌊ Subgroup methylaspartate ammonia-lyase

     ⌊ Family methylaspartate ammonia-lyase

  ⌊ FunctionalDomain methylaspartate ammonia-lyase (ID 38609)

Superfamily Assignment Evidence Code(s) IEA
Family Assignment Evidence Code IEA
This entry was last updated onNov. 21, 2017

References to Other Databases

Genbank

SpeciesGIAccessionProteome
Citrobacter youngae Taxon ID: 133448 493736239 WP_006685444.1 (RefSeq)
Citrobacter youngae ATCC 29220 Taxon ID: 500640 291070109 EFE08218.1 (Genbank) URP

Uniprot

Protein NameAccessionEC Number Identifier
n/a D4BC82 D4BC82_9ENTR (TrEMBL)

Sequence

Length of Enzyme (full-length): 413 | Length of Functional Domain: 413

1       10        20        30        40        50        60

MKIKQALFTAGYSSFYFDDQQAIKNGAGHDGFIYTGSPVTPGFTSVRQAGECVSVQLILE
NGAVAVGDCAAVQYSGAGGRDPLFLAENFIPFLNDHIKPLLEGRDVDAFLPNARFFDQLR
IDGHLLHTAVRYGLSQALLDAAALATGRLKTEVICDEWQLPCVPEAIPLFGQSGDDRYIA
VDKMILKGVDVLPHALINNVEEKLGFKGEKLREYVRWLSNRILTLRTSERYHPTLHIDVY
GTIGLIFDMDPVRCAEYIASLEAEAQGLPLYIEGPVDAGNKPDQIRMLTAITKELTRLGS
GVKIVADEWCNTYQDIVDFTDAGSCHMVQIKTPDLGGIHNIVDAVLYCNKHAMEAYQGGT
CNETEISARTCVHVALAARPMRMLVKPGMGFDEGLNIVFNEMNRTIALLQTKD
This shows the full-length sequence of the enzyme. The region of the functional domain is highlighted in black letters, while the residual residues are shown in grey. The Superfamily domain, when present, is shown using underlining. In many cases the functional domain is the full-length sequence.
Conserved catalytic residues (as determined by automated alignment to family, subgroup, or superfamily HMMs) are shown with teal highlighting . Conserved catalytic residues which do not matched the Conserved Alignment Residue are shown with maroon highlighting . Information regarding their function can be found in the Conserved Residues section below.
FASTA formatted full-length sequence.
BLAST this sequence against SFLD.
Scan SFLD-HMMs with this sequence.

Conserved Residues
Superfamily CAR This EFD conserves 3/3 Superfamily-specific Conserved Alignment Residues.
Position Amino Acid Location Function Role Evidence Code Reference
238 Asp (D) side chain metal binding ligand metal ligand -- binding ISS PubMed:8987982
273 Glu (E) side chain metal binding ligand metal ligand -- binding ISS PubMed:8987982
307 Asp (D) side chain metal binding ligand metal ligand -- binding ISS PubMed:8987982
Subgroup CAR This EFD conserves 4/4 Subgroup-specific Conserved Alignment Residues.
Position Amino Acid Location Function Role Evidence Code Reference
238 Asp (D) side chain metal ligand metal ligand -- binding ICS PubMed:11748244
273 Glu (E) side chain metal ligand metal ligand -- binding ICS PubMed:11748244
307 Asp (D) side chain metal ligand metal ligand -- binding ICS PubMed:11748244
331 Lys (K) side chain abstracts alpha proton (base) proton relay -- reactant ICS PubMed:11748244
Family CAR This EFD conserves 5/5 Family-specific Conserved Alignment Residues.
Position Amino Acid Location Function Role Evidence Code Reference
194 His (H) side chain stabilizes transition state electrostatic stabiliser -- spectator ICS PubMed:11748244
238 Asp (D) side chain metal binding ligand metal ligand -- binding ICS PubMed:11748244
273 Glu (E) side chain metal binding ligand metal ligand -- binding ICS PubMed:11748244
307 Asp (D) side chain metal binding ligand metal ligand -- binding ICS PubMed:11748244
331 Lys (K) side chain abstracts alpha proton (base) proton relay -- reactant ICS PubMed:11748244

Structures

PDB ID Title Molecule Name Number of
EFDs		 Resolution (Å) Mutant? Het group Links
1KKR Crystal Structure Of Citrobacter Amalonaticus Methylaspartate Ammonia Lyase Containing (2S,3S)-3-Methylaspartic Acid 3-Methylaspartate Ammonia-Lyase 25 2.1 Selenomethionine
(2 more ⇓) 		CSA • PDB • PDBSum
1KKO Crystal Structure Of Citrobacter Amalonaticus Methylaspartate Ammonia Lyase 3-Methylaspartate Ammonia-Lyase 25 1.33 Selenomethionine • Sulfate Ion CSA • PDB • PDBSum
Percent identity and alignment length from the BLAST match of the Functional Domain sequence to the PDB sequence.
"Yes" indicates that a GI associated with this Functional Domain was mapped to the PDB ID via UniProtKB.

Curation History
Time Change Annotation Old Value New Value
Nov. 3, 2014, 2:42 a.m. update curation agent updateSFLD2.py setDomainBoundaries.py
EC number assigned by UniProtKB accession ID.