Top Level Name

  ⌊ Superfamily (core) Radical SAM

    ⌊ Subgroup SPASM/twitch domain containing

  ⌊ main SPASM domain-containing

  ⌊ thioether bond formation requiring two auxiliary iron-sulfur clusters

Family known
Total 100% <100% Family unknown
Functional domains 1448 112 1 1335
UniProtKB 2376 0 144 2232
GI 4548 268 1 4279
Structures 0
Reactions 0
Functional domains of this subgroup were last updated on June 10, 2017
New functional domains were last added to this subgroup on June 22, 2014

Members of this subgroup are all responsible for forming thioether bonds in substrate products and require two auxiliary iron-sulfur clusters in addition to the canonical RSS cluster.

No References.

No notes.

Static File Downloads

File Name Description Parameters Stats
network.sg1384.bs60.mek250K.xgmml One node per sequence network min bit score = 60
max edge count = 250K		 size = 129M
num_edges = 250000
num_nodes = 1448
repnet.sg1384.th50.pE20.mek250K.xgmml Representative network: each node is a group of similar sequences node similarity threshold = 50
max edge count = 250K
min -log10 E = 20		 size = 7.9M
num_edges = 24588
num_nodes = 306
sfld_alignment_sg1384.msa Annotated Sequence Alignment, Stockholm format 594 sequences
size: 428K

Total number of functional domains in this group.
Number of Functional Domains that have been manually or automatically been assigned to a family.
Number of Functional Domains that have not been assigned to a family.
Number of structures available from the PDB for members of this group.
Number of Functional Domains with 100% of Conserved Residues
Number of Functional Domains with less than 100% Conserved Residues
Subgroup ▸ Legend T K C U S
┗ 2: thioether bond formation requiring two auxiliary iron-sulfur clusters 1448 113 112 1335 0
┗ quinohemoprotein amine dehydrogenase maturation protein (QhpD-like) 112 112 111 0
┗ Tte1186a maturase 1 1 1 0
Depth of the multi-level Subgroup hierarchy.