Family known  |
|||||||
| Total |
100% |
<100% |
Family unknown |
||||
| Functional domains | 2540 | 0 | 0 | 2540 | |||
| UniProtKB | 0 | 0 | 0 | 0 | |||
| GI | 0 | 0 | 0 | 0 | |||
| Structures | 14 | ||||||
| Reactions | 0 | ||||||
| Functional domains of this subgroup were last updated on Nov. 22, 2017 | |||||||
| New functional domains were last added to this subgroup on Nov. 25, 2014 | |||||||
The Hub Subgroup is a large and diverse subgroup of sequences from which other subgroups of the nitroreductase superfamily radiate. Representative genes are found in archaea, bacteria, plants and protozoa.
No References.
No notes.
Static File Downloads
| File Name | Description | Parameters | Stats |
|---|---|---|---|
| repnet.sg1227.th50.pE20.mek250.xgmml | Representative network: each node is a group of similar sequences | node similarity threshold = 50 max edge count = 250 min -log10 E = 20 |
size = 5.9M num_edges = 15191 num_nodes = 457 |
| sfld_alignment_sg1227.msa | Annotated Sequence Alignment, Stockholm format | 544 sequences size: 167K |
Total number of functional domains in this group.
Number of Functional Domains that have been manually or automatically been assigned to a family.
Number of Functional Domains that have not been assigned to a family.
Number of structures available from the PDB for members of this group.
Number of Functional Domains with 100% of Conserved Residues
Number of Functional Domains with less than 100% Conserved Residues
| Subgroup ▸ Legend | T |
K |
C |
U |
S |
||
|---|---|---|---|---|---|---|---|
| nitoreductase hub subgroup | 2540 | 0 | 0 | 2540 | 14 | ||
| ┗ 1: NTR Hub 2nd level subgroup 1 | 552 | 0 | 0 | 552 | 3 | ||
| ┗ 1: NTR Hub 2nd level subgroup 10 | 58 | 0 | 0 | 58 | 0 | ||
| ┗ 1: NTR Hub 2nd level subgroup 11 | 129 | 0 | 0 | 129 | 1 | ||
| ┗ 1: NTR Hub 2nd level subgroup 12 | 126 | 0 | 0 | 126 | 1 | ||
| ┗ 1: NTR Hub 2nd level subgroup 13 | 19 | 0 | 0 | 19 | 0 | ||
| ┗ 1: NTR Hub 2nd level subgroup 14 | 27 | 0 | 0 | 27 | 0 | ||
| ┗ 1: NTR Hub 2nd level subgroup 15 | 30 | 0 | 0 | 30 | 0 | ||
| ┗ 1: NTR Hub 2nd level subgroup 2 | 159 | 0 | 0 | 159 | 1 | ||
| ┗ 1: NTR Hub 2nd level subgroup 3 | 14 | 0 | 0 | 14 | 0 | ||
| ┗ 1: NTR Hub 2nd level subgroup 4 | 465 | 0 | 0 | 465 | 3 | ||
| ┗ 1: NTR Hub 2nd level subgroup 5 | 310 | 0 | 0 | 310 | 3 | ||
| ┗ 1: NTR Hub 2nd level subgroup 6 | 313 | 0 | 0 | 313 | 1 | ||
| ┗ 1: NTR Hub 2nd level subgroup 7 | 130 | 0 | 0 | 130 | 1 | ||
| ┗ 1: NTR Hub 2nd level subgroup 8 | 35 | 0 | 0 | 35 | 0 | ||
| ┗ 1: NTR Hub 2nd level subgroup 9 | 173 | 0 | 0 | 173 | 0 |
Depth of the multi-level Subgroup hierarchy.