Top Level Name

  ⌊ Superfamily (core) Radical SAM

    ⌊ Subgroup BATS domain containing

  HMD cofactor maturase (HmdB-like)

Family known
Total 100% <100% Family unknown
Functional domains 39 39 0 0
UniProtKB 42 0 42 0
GI 113 113 0 0
Structures 0
Reactions 0
Functional domains of this subgroup were last updated on June 10, 2017
New functional domains were last added to this subgroup on June 22, 2014

Small subgroup named from the only family known to-date.

McGlynn SE, Boyd ES, Shepard EM, Lange RK, Gerlach R, Broderick JB, Peters JW

Identification and characterization of a novel member of the radical AdoMet enzyme superfamily and implications for the biosynthesis of the Hmd hydrogenase active site cofactor

▸ Abstract

J Bacteriol 2010;192(2):595-598 | PubMed ID: 19897660

No notes.

Static File Downloads

File Name Description Parameters Stats
network.sg1279.bs60.mek250K.xgmml One node per sequence network min bit score = 60
max edge count = 250K
size = 440K
num_edges = 741
num_nodes = 39
repnet.sg1279.th50.pE20.mek250K.xgmml Representative network: each node is a group of similar sequences node similarity threshold = 50
max edge count = 250K
min -log10 E = 20
size = 31K
num_edges = 10
num_nodes = 5
sfld_alignment_sg1279.msa Annotated Sequence Alignment, Stockholm format 29 sequences
size: 15K

Total number of functional domains in this group.
Number of Functional Domains that have been manually or automatically been assigned to a family.
Number of Functional Domains that have not been assigned to a family.
Number of structures available from the PDB for members of this group.
Number of Functional Domains with 100% of Conserved Residues
Number of Functional Domains with less than 100% Conserved Residues
Subgroup ▸ Legend T K C U S
┗ 1: HMD cofactor maturase (HmdB-like) 39 39 39 0 0
┗ HMD cofactor maturase (HmdB-like) 39 39 39 0
Depth of the multi-level Subgroup hierarchy.