Top Level Name
⌊ Superfamily (core) Haloacid Dehalogenase
⌊ FunctionalDomain uncharacterized haloacid dehalogenase superfamily sequence (ID 465231)
No Notes.
Superfamily Assignment Evidence Code(s) | IEA |
This entry was last updated on | Feb. 13, 2017 |
References to Other Databases
Genbank
Species | GI | Accession | Proteome |
---|---|---|---|
Escherichia coli Taxon ID: 562 | 486203920 | WP_001551202.1 (RefSeq) | URP |
Escherichia coli 6-175-07_S1_C3 Taxon ID: 1444114 | 660159737 | KEM52945.1 (Genbank) | URP |
Escherichia coli 6-175-07_S1_C2 Taxon ID: 1444089 | 658670249 | KEJ14395.1 (Genbank) | URP |
Escherichia coli 1-392-07_S1_C2 Taxon ID: 1444081 | 651806793 | KDW82433.1 (Genbank) | URP |
Escherichia coli 1-392-07_S1_C1 Taxon ID: 1444053 | 651797818 | KDW73741.1 (Genbank) | URP |
Escherichia coli 1-110-08_S4_C1 Taxon ID: 1444215 | 598697339 | EYE03897.1 (Genbank) | URP |
Escherichia coli LAU-EC10 Taxon ID: 1417796 | 564928299 | ETE23302.1 (Genbank) | URP |
Escherichia coli SCD2 Taxon ID: 1337385 | 553020660 | ESA27544.1 (Genbank) | URP |
Escherichia coli UMEA 3033-1 Taxon ID: 1281175 | 535484509 | EQW23982.1 (Genbank) | URP |
Escherichia coli HVH 41 (4-2677849) Taxon ID: 1280991 | 534712924 | EQO66491.1 (Genbank) | URP |
Escherichia coli KTE121 Taxon ID: 1182711 | 508462147 | EOW31768.1 (Genbank) | URP |
Escherichia coli KTE199 Taxon ID: 1181745 | 508357188 | EOV28642.1 (Genbank) | URP |
Escherichia coli KTE76 Taxon ID: 1182683 | 431159626 | ELE60170.1 (Genbank) | URP |
Escherichia coli KTE237 Taxon ID: 1181781 | 431080550 | ELD87345.1 (Genbank) | URP |
Escherichia coli KTE236 Taxon ID: 1181780 | 431074839 | ELD82376.1 (Genbank) | URP |
Escherichia coli IS1 Taxon ID: 1433131 | 568389112 | URP | |
obsolete GIs = 432621927, 432548730, 432543240 | |||
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Uniprot
Protein Name | Accession | EC Number
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Identifier |
---|---|---|---|
n/a | A0A0V9MRG2 | A0A0V9MRG2_ECOLX (TrEMBL) | |
n/a | T6AF77 | T6AF77_ECOLX (TrEMBL) | |
n/a | V8KDW5 | V8KDW5_ECOLX (TrEMBL) | |
n/a | L3QKB7 | L3QKB7_ECOLX (TrEMBL) | |
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Length of Enzyme (full-length): 222 | Length of Functional Domain: 216
1 10 20 30 40 50 60
MSTPRQILAAIFDMDGLLIDSEPLWDRAELDVMASLGVDISRRNELPDTLGLRIDMVVDL
WYARQPWNGPSRQEVVERVIARAISLVEETRPLLPGVREAVALCKEQGLLVGLASASPLH
MLEKVLTMFDLRDSFDALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIA
SKAAHMRSIVVPAPEAQNDPRFVLANVKLSSLTELTAKDLLG
This shows the full-length sequence of the enzyme.
The
region of the functional domain is highlighted in black letters,
while the
residual residues are shown in grey.
The Superfamily domain, when present, is
shown using underlining.
In many cases the functional domain is the full-length sequence.
Conserved catalytic residues (as determined by automated alignment to family, subgroup, or superfamily HMMs) are shown with teal highlighting . Conserved catalytic residues which do not matched the Conserved Alignment Residue are shown with maroon highlighting . Information regarding their function can be found in the Conserved Residues section below.
Conserved catalytic residues (as determined by automated alignment to family, subgroup, or superfamily HMMs) are shown with teal highlighting . Conserved catalytic residues which do not matched the Conserved Alignment Residue are shown with maroon highlighting . Information regarding their function can be found in the Conserved Residues section below.
FASTA formatted full-length sequence.
BLAST this sequence against SFLD.
Scan SFLD-HMMs with this sequence.