Top Level Name

  ⌊ Superfamily (core) Radical SAM

    ⌊ Subgroup Uncharacterised Radical SAM Subgroup 20

Family known
Total 100% <100% Family unknown
Functional domains 81 0 0 81
UniProtKB 124 0 0 124
GI 297 0 0 297
Structures 0
Reactions 0
Functional domains of this subgroup were last updated on Feb. 5, 2017
New functional domains were last added to this subgroup on Aug. 15, 2012

Appears to lack a canonical CxxxCxxC motif, but contains two other three cysteine motives which might be involved in the binding of the [4Fe-4S]-AdoMet moiety. The first is close to the N-terminus at residues C235, C245 and C248. The second is at the C-terminus at residues C465, C468 and C471 (Numbering taken from the multiple sequence alignment).

No References.

No notes.

Static File Downloads

File Name Description Parameters Stats
network.sg1107.bs60.mek250K.xgmml One node per sequence network min bit score = 60
max edge count = 250K
size = 1.8M
num_edges = 3240
num_nodes = 81
repnet.sg1107.th50.pE20.mek250.xgmml Representative network: each node is a group of similar sequences node similarity threshold = 50
max edge count = 250
min -log10 E = 20
size = 46K
num_edges = 10
num_nodes = 5
sfld_alignment_sg1107.msa Annotated Sequence Alignment, Stockholm format 78 sequences
size: 44K

Total number of functional domains in this group.
Number of Functional Domains that have been manually or automatically been assigned to a family.
Number of Functional Domains that have not been assigned to a family.
Number of structures available from the PDB for members of this group.
Number of Functional Domains with 100% of Conserved Residues
Number of Functional Domains with less than 100% Conserved Residues
Subgroup ▸ Legend T K C U S
Uncharacterised Radical SAM Subgroup 20 81 0 0 81 0
Depth of the multi-level Subgroup hierarchy.