Top Level Name

  ⌊ Superfamily (core) Radical SAM

    ⌊ Subgroup anaerobic coproporphyrinogen-III oxidase like

     ⌊ Family heme degradation proteins (HutW/ChuW-like)

Total 100% <100%
Functional domains 36 36 0
UniProtKB 526 526 0
GI 903 903 0
Structures 0
Reactions 0
Functional domains of this family were last updated on June 10, 2017
New functional domains were last added to this family on June 22, 2014

ChuW - the CFM for this family - has been demonstrated to form part of an oxygen-independent heme-degradation pathway. Specifically, ChuW facilitates the liberation of iron and produces a tetrapyrrole product termed "anaerobilin" by LaMattina et al.

Dailey HA, Gerdes S, Dailey TA, Burch JS, Phillips JD

Noncanonical coproporphyrin-dependent bacterial heme biosynthesis pathway that does not use protoporphyrin

▸ Abstract

Proc Natl Acad Sci U S A 2015;112(7):2210-2215 | PubMed ID: 25646457

LaMattina JW, Nix DB, Lanzilotta WN

Radical new paradigm for heme degradation in Escherichia coli O157:H7

▸ Abstract

Proc Natl Acad Sci U S A 2016;113(43):12138-12143 | PubMed ID: 27791000

Relates to class B in Dailey PNAS paper

Static File Downloads

File Name Description Parameters Stats
network.fam311.bs60.mek250K.xgmml One node per sequence network min bit score = 60
max edge count = 250K
size = 460K
num_edges = 630
num_nodes = 36
sfld_alignment_fam311.msa Annotated Sequence Alignment, Stockholm format 36 sequences
size: 26K

Total number of functional domains in this group.
Number of Functional Domains that have been manually or automatically been assigned to a family.
Number of Functional Domains that have not been assigned to a family.
Number of structures available from the PDB for members of this group.
Number of Functional Domains with 100% of Conserved Residues
Number of Functional Domains with less than 100% Conserved Residues